Yes, if you have already saved the 3 views from the same story, you can set their cut planes one-by-one.
To achieve this, open the View Settings dialog. Under 2D/3D Documents tab click on the button to reach the Floor Plan Cut Plane Settings dialog. This setting will refer to the edited view only.
See also: http://www.graphisoft.com/ftp/publishing/ac15_help_INT/Files/wwhelp/wwhimpl/js/html/wwhelp.htm#href=...